Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.15■□□□□ 0.5
SSR1P43307 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SSR1P43307 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.15■□□□□ 0.5
SSR1P43307 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR1P43307 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
SSR1P43307 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
SSR1P43307 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.14■□□□□ 0.49
SSR1P43307 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SSR1P43307 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SSR1P43307 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SSR1P43307 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.14■□□□□ 0.49
SSR1P43307 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.14■□□□□ 0.49
SSR1P43307 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.14■□□□□ 0.49
SSR1P43307 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.14■□□□□ 0.49
SSR1P43307 AC092329.2-201ENST00000598402 547 ntBASIC18.14■□□□□ 0.49
SSR1P43307 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.14■□□□□ 0.49
SSR1P43307 AC091076.1-201ENST00000610741 619 ntBASIC18.14■□□□□ 0.49
SSR1P43307 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.14■□□□□ 0.49
SSR1P43307 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.14■□□□□ 0.49
SSR1P43307 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.14■□□□□ 0.49
SSR1P43307 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.14■□□□□ 0.49
SSR1P43307 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.14■□□□□ 0.49
SSR1P43307 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.14■□□□□ 0.49
SSR1P43307 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.14■□□□□ 0.49
SSR1P43307 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
SSR1P43307 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.14■□□□□ 0.49
SSR1P43307 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SSR1P43307 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SSR1P43307 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSR1P43307 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SSR1P43307 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SSR1P43307 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
SSR1P43307 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SSR1P43307 AC092068.3-201ENST00000587894 2016 ntBASIC18.13■□□□□ 0.49
SSR1P43307 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SSR1P43307 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.13■□□□□ 0.49
SSR1P43307 NUS1P2-201ENST00000417358 873 ntBASIC18.13■□□□□ 0.49
SSR1P43307 IGHV3-47-201ENST00000425060 335 ntBASIC18.13■□□□□ 0.49
SSR1P43307 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.13■□□□□ 0.49
SSR1P43307 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.13■□□□□ 0.49
SSR1P43307 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.13■□□□□ 0.49
SSR1P43307 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.13■□□□□ 0.49
SSR1P43307 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.13■□□□□ 0.49
SSR1P43307 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.13■□□□□ 0.49
SSR1P43307 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 INTS4P1-201ENST00000438455 1935 ntBASIC18.13■□□□□ 0.49
SSR1P43307 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 AC103702.1-201ENST00000548801 2630 ntBASIC18.13■□□□□ 0.49
SSR1P43307 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SSR1P43307 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.13■□□□□ 0.49
SSR1P43307 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSR1P43307 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSR1P43307 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSR1P43307 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SSR1P43307 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSR1P43307 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSR1P43307 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSR1P43307 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SSR1P43307 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.12■□□□□ 0.49
SSR1P43307 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.12■□□□□ 0.49
SSR1P43307 MIR1224-201ENST00000408193 85 ntBASIC18.12■□□□□ 0.49
SSR1P43307 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.12■□□□□ 0.49
SSR1P43307 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms