Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC1A3P43003 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC1A3P43003 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC1A3P43003 CLEC4GP1-201ENST00000596555 870 ntBASIC15.67■□□□□ 0.1
SLC1A3P43003 REXO1L6P-202ENST00000619970 1078 ntBASIC15.67■□□□□ 0.1
SLC1A3P43003 AL355877.3-201ENST00000622820 899 ntBASIC15.67■□□□□ 0.1
SLC1A3P43003 AL022326.1-202ENST00000641533 845 ntBASIC15.67■□□□□ 0.1
SLC1A3P43003 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC1A3P43003 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A3P43003 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC1A3P43003 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A3P43003 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC1A3P43003 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.67■□□□□ 0.1
SLC1A3P43003 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A3P43003 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 CICP6-201ENST00000457191 2729 ntBASIC15.67■□□□□ 0.1
SLC1A3P43003 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC1A3P43003 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC1A3P43003 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC1A3P43003 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 LINC00982-205ENST00000420957 435 ntBASIC15.66■□□□□ 0.1
SLC1A3P43003 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 BX005266.1-201ENST00000473402 457 ntBASIC15.66■□□□□ 0.1
SLC1A3P43003 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SLC1A3P43003 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC1A3P43003 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.66■□□□□ 0.1
SLC1A3P43003 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 NKAPP1-205ENST00000585790 367 ntBASIC15.66■□□□□ 0.1
SLC1A3P43003 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC1A3P43003 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC1A3P43003 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC1A3P43003 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC1A3P43003 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC1A3P43003 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC1A3P43003 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC1A3P43003 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A3P43003 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A3P43003 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A3P43003 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
SLC1A3P43003 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.65■□□□□ 0.1
SLC1A3P43003 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC1A3P43003 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC1A3P43003 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A3P43003 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A3P43003 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A3P43003 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A3P43003 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms