Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.93■□□□□ 0.46
RFC1P35251 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.93■□□□□ 0.46
RFC1P35251 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.93■□□□□ 0.46
RFC1P35251 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC1P35251 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.93■□□□□ 0.46
RFC1P35251 RN7SL510P-201ENST00000581311 263 ntBASIC17.93■□□□□ 0.46
RFC1P35251 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RFC1P35251 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RFC1P35251 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC1P35251 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RFC1P35251 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RFC1P35251 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RFC1P35251 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.93■□□□□ 0.46
RFC1P35251 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFC1P35251 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RFC1P35251 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.92■□□□□ 0.46
RFC1P35251 AC243591.1-201ENST00000452967 1364 ntBASIC17.92■□□□□ 0.46
RFC1P35251 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RFC1P35251 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.92■□□□□ 0.46
RFC1P35251 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.92■□□□□ 0.46
RFC1P35251 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RFC1P35251 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RFC1P35251 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RFC1P35251 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.92■□□□□ 0.46
RFC1P35251 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 AC078925.2-201ENST00000624013 1973 ntBASIC17.92■□□□□ 0.46
RFC1P35251 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.92■□□□□ 0.46
RFC1P35251 AL450487.1-201ENST00000426799 995 ntBASIC17.92■□□□□ 0.46
RFC1P35251 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.92■□□□□ 0.46
RFC1P35251 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.92■□□□□ 0.46
RFC1P35251 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.92■□□□□ 0.46
RFC1P35251 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.92■□□□□ 0.46
RFC1P35251 RNPS1P1-201ENST00000507437 918 ntBASIC17.92■□□□□ 0.46
RFC1P35251 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.92■□□□□ 0.46
RFC1P35251 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.92■□□□□ 0.46
RFC1P35251 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.92■□□□□ 0.46
RFC1P35251 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.92■□□□□ 0.46
RFC1P35251 AL121912.1-201ENST00000603683 238 ntBASIC17.92■□□□□ 0.46
RFC1P35251 AC107918.4-202ENST00000641623 219 ntBASIC17.92■□□□□ 0.46
RFC1P35251 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.92■□□□□ 0.46
RFC1P35251 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RFC1P35251 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RFC1P35251 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
RFC1P35251 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
RFC1P35251 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RFC1P35251 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC1P35251 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.92■□□□□ 0.46
RFC1P35251 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.91■□□□□ 0.46
RFC1P35251 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RFC1P35251 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RFC1P35251 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RFC1P35251 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.91■□□□□ 0.46
RFC1P35251 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.91■□□□□ 0.46
RFC1P35251 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.91■□□□□ 0.46
RFC1P35251 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RFC1P35251 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.91■□□□□ 0.46
RFC1P35251 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.91■□□□□ 0.46
RFC1P35251 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.91■□□□□ 0.46
RFC1P35251 RPS2P1-201ENST00000434010 821 ntBASIC17.91■□□□□ 0.46
RFC1P35251 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.91■□□□□ 0.46
RFC1P35251 AC079781.3-201ENST00000449110 356 ntBASIC17.91■□□□□ 0.46
RFC1P35251 FAM197Y8-203ENST00000450145 560 ntBASIC17.91■□□□□ 0.46
RFC1P35251 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.91■□□□□ 0.46
RFC1P35251 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.91■□□□□ 0.46
RFC1P35251 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.91■□□□□ 0.46
RFC1P35251 TERC-201ENST00000602385 541 ntBASIC17.91■□□□□ 0.46
RFC1P35251 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.91■□□□□ 0.46
RFC1P35251 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms