Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.56□□□□□ -0.4
CKS2P33552 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 AC116562.2-201ENST00000507042 360 ntBASIC12.56□□□□□ -0.4
CKS2P33552 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.56□□□□□ -0.4
CKS2P33552 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.56□□□□□ -0.4
CKS2P33552 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 CD177P1-201ENST00000606252 935 ntBASIC12.56□□□□□ -0.4
CKS2P33552 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS2P33552 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CKS2P33552 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS2P33552 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
CKS2P33552 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CKS2P33552 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS2P33552 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS2P33552 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS2P33552 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CKS2P33552 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS2P33552 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CKS2P33552 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.55□□□□□ -0.4
CKS2P33552 SLC25A1P2-201ENST00000430693 912 ntBASIC12.55□□□□□ -0.4
CKS2P33552 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS2P33552 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 AC002558.1-201ENST00000488906 803 ntBASIC12.55□□□□□ -0.4
CKS2P33552 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS2P33552 AP002490.2-201ENST00000524791 560 ntBASIC12.55□□□□□ -0.4
CKS2P33552 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CKS2P33552 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS2P33552 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CKS2P33552 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CKS2P33552 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS2P33552 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS2P33552 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS2P33552 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CKS2P33552 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CKS2P33552 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS2P33552 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS2P33552 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS2P33552 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS2P33552 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CKS2P33552 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms