Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
VARSP26640 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VARSP26640 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.78■□□□□ 0.28
VARSP26640 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.78■□□□□ 0.28
VARSP26640 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 AC003669.1-201ENST00000334569 611 ntBASIC16.78■□□□□ 0.28
VARSP26640 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.78■□□□□ 0.28
VARSP26640 KLF4P1-201ENST00000412782 1185 ntBASIC16.78■□□□□ 0.28
VARSP26640 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.78■□□□□ 0.28
VARSP26640 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.78■□□□□ 0.28
VARSP26640 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 SERPINA7P1-201ENST00000443077 631 ntBASIC16.78■□□□□ 0.28
VARSP26640 AC132008.2-207ENST00000454517 770 ntBASIC16.78■□□□□ 0.28
VARSP26640 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.78■□□□□ 0.28
VARSP26640 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.78■□□□□ 0.28
VARSP26640 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.78■□□□□ 0.28
VARSP26640 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.78■□□□□ 0.28
VARSP26640 AP000867.4-201ENST00000641616 219 ntBASIC16.78■□□□□ 0.28
VARSP26640 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VARSP26640 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VARSP26640 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.78■□□□□ 0.28
VARSP26640 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VARSP26640 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
VARSP26640 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.77■□□□□ 0.28
VARSP26640 AC105020.1-201ENST00000435356 2205 ntBASIC16.77■□□□□ 0.28
VARSP26640 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.77■□□□□ 0.28
VARSP26640 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VARSP26640 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.77■□□□□ 0.28
VARSP26640 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.77■□□□□ 0.28
VARSP26640 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.77■□□□□ 0.28
VARSP26640 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.77■□□□□ 0.28
VARSP26640 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.77■□□□□ 0.28
VARSP26640 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARSP26640 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.77■□□□□ 0.28
VARSP26640 AL773604.1-201ENST00000617417 272 ntBASIC16.77■□□□□ 0.28
VARSP26640 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VARSP26640 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.77■□□□□ 0.28
VARSP26640 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VARSP26640 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VARSP26640 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
VARSP26640 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VARSP26640 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VARSP26640 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.77■□□□□ 0.27
VARSP26640 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VARSP26640 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VARSP26640 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.76■□□□□ 0.27
VARSP26640 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.76■□□□□ 0.27
VARSP26640 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
VARSP26640 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VARSP26640 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.76■□□□□ 0.27
VARSP26640 SLC25A1P3-201ENST00000395415 828 ntBASIC16.76■□□□□ 0.27
VARSP26640 MRPL3P1-201ENST00000400109 1033 ntBASIC16.76■□□□□ 0.27
VARSP26640 ABCD1P5-201ENST00000445663 754 ntBASIC16.76■□□□□ 0.27
VARSP26640 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VARSP26640 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.76■□□□□ 0.27
VARSP26640 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.76■□□□□ 0.27
VARSP26640 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.76■□□□□ 0.27
VARSP26640 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 AP001269.4-201ENST00000609611 512 ntBASIC16.76■□□□□ 0.27
VARSP26640 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.76■□□□□ 0.27
VARSP26640 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VARSP26640 AC148477.5-201ENST00000625164 1645 ntBASIC16.76■□□□□ 0.27
VARSP26640 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARSP26640 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VARSP26640 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms