Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NCLP19338 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.31■□□□□ 0.84
NCLP19338 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.31■□□□□ 0.84
NCLP19338 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NCLP19338 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.31■□□□□ 0.84
NCLP19338 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
NCLP19338 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NCLP19338 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 LINC00554-201ENST00000564841 3011 ntBASIC20.31■□□□□ 0.84
NCLP19338 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.31■□□□□ 0.84
NCLP19338 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.31■□□□□ 0.84
NCLP19338 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.31■□□□□ 0.84
NCLP19338 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.31■□□□□ 0.84
NCLP19338 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.31■□□□□ 0.84
NCLP19338 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
NCLP19338 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NCLP19338 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NCLP19338 RNF216P1-203ENST00000404404 2427 ntBASIC20.31■□□□□ 0.84
NCLP19338 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.31■□□□□ 0.84
NCLP19338 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NCLP19338 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NCLP19338 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.3■□□□□ 0.84
NCLP19338 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NCLP19338 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
NCLP19338 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NCLP19338 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.3■□□□□ 0.84
NCLP19338 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.3■□□□□ 0.84
NCLP19338 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.3■□□□□ 0.84
NCLP19338 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.3■□□□□ 0.84
NCLP19338 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NCLP19338 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NCLP19338 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NCLP19338 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC20.3■□□□□ 0.84
NCLP19338 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.3■□□□□ 0.84
NCLP19338 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC20.3■□□□□ 0.84
NCLP19338 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.3■□□□□ 0.84
NCLP19338 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.3■□□□□ 0.84
NCLP19338 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLP19338 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
NCLP19338 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
NCLP19338 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NCLP19338 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.29■□□□□ 0.84
NCLP19338 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NCLP19338 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.29■□□□□ 0.84
NCLP19338 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.29■□□□□ 0.84
NCLP19338 AC069148.1-201ENST00000608741 768 ntBASIC20.29■□□□□ 0.84
NCLP19338 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.29■□□□□ 0.84
NCLP19338 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NCLP19338 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NCLP19338 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCLP19338 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCLP19338 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.28■□□□□ 0.84
NCLP19338 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms