Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.76■□□□□ 0.59
SMPD1P17405 AP3S2-216ENST00000617003 1561 ntBASIC18.76■□□□□ 0.59
SMPD1P17405 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.76■□□□□ 0.59
SMPD1P17405 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.76■□□□□ 0.59
SMPD1P17405 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.76■□□□□ 0.59
SMPD1P17405 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMPD1P17405 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMPD1P17405 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.76■□□□□ 0.59
SMPD1P17405 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.76■□□□□ 0.59
SMPD1P17405 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.76■□□□□ 0.59
SMPD1P17405 AC005034.1-201ENST00000426657 489 ntBASIC18.76■□□□□ 0.59
SMPD1P17405 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.76■□□□□ 0.59
SMPD1P17405 AC105233.2-201ENST00000523697 349 ntBASIC18.76■□□□□ 0.59
SMPD1P17405 AF228730.5-201ENST00000530288 346 ntBASIC18.76■□□□□ 0.59
SMPD1P17405 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.76■□□□□ 0.59
SMPD1P17405 RARRES2P9-201ENST00000565168 469 ntBASIC18.76■□□□□ 0.59
SMPD1P17405 AC073389.1-201ENST00000595595 795 ntBASIC18.76■□□□□ 0.59
SMPD1P17405 AC018529.1-201ENST00000613063 361 ntBASIC18.76■□□□□ 0.59
SMPD1P17405 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMPD1P17405 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
SMPD1P17405 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SMPD1P17405 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.75■□□□□ 0.59
SMPD1P17405 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SMPD1P17405 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.75■□□□□ 0.59
SMPD1P17405 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SMPD1P17405 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.75■□□□□ 0.59
SMPD1P17405 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.75■□□□□ 0.59
SMPD1P17405 MRPS18AP1-201ENST00000414458 589 ntBASIC18.75■□□□□ 0.59
SMPD1P17405 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.75■□□□□ 0.59
SMPD1P17405 AC241585.1-201ENST00000433527 519 ntBASIC18.75■□□□□ 0.59
SMPD1P17405 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.75■□□□□ 0.59
SMPD1P17405 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.75■□□□□ 0.59
SMPD1P17405 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.75■□□□□ 0.59
SMPD1P17405 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.75■□□□□ 0.59
SMPD1P17405 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.75■□□□□ 0.59
SMPD1P17405 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMPD1P17405 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 AC108860.2-201ENST00000562760 2183 ntBASIC18.75■□□□□ 0.59
SMPD1P17405 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMPD1P17405 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.74■□□□□ 0.59
SMPD1P17405 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.74■□□□□ 0.59
SMPD1P17405 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.74■□□□□ 0.59
SMPD1P17405 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.74■□□□□ 0.59
SMPD1P17405 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SMPD1P17405 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.74■□□□□ 0.59
SMPD1P17405 KRT18P34-201ENST00000488218 1270 ntBASIC18.74■□□□□ 0.59
SMPD1P17405 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.74■□□□□ 0.59
SMPD1P17405 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.74■□□□□ 0.59
SMPD1P17405 AC027369.6-201ENST00000525520 931 ntBASIC18.74■□□□□ 0.59
SMPD1P17405 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.74■□□□□ 0.59
SMPD1P17405 AC012645.4-201ENST00000610691 1061 ntBASIC18.74■□□□□ 0.59
SMPD1P17405 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 AL590560.3-201ENST00000623350 461 ntBASIC18.74■□□□□ 0.59
SMPD1P17405 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SMPD1P17405 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.74■□□□□ 0.59
SMPD1P17405 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SMPD1P17405 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMPD1P17405 FOXO1B-201ENST00000504678 1527 ntBASIC18.74■□□□□ 0.59
SMPD1P17405 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMPD1P17405 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMPD1P17405 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMPD1P17405 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms