Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.95■□□□□ 0.78
TOP1P11387 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.95■□□□□ 0.78
TOP1P11387 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.95■□□□□ 0.78
TOP1P11387 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.95■□□□□ 0.78
TOP1P11387 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.95■□□□□ 0.78
TOP1P11387 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
TOP1P11387 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.95■□□□□ 0.78
TOP1P11387 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TOP1P11387 AC084018.2-201ENST00000613093 2607 ntBASIC19.95■□□□□ 0.78
TOP1P11387 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TOP1P11387 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TOP1P11387 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
TOP1P11387 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.94■□□□□ 0.78
TOP1P11387 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TOP1P11387 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.94■□□□□ 0.78
TOP1P11387 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.94■□□□□ 0.78
TOP1P11387 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.94■□□□□ 0.78
TOP1P11387 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.94■□□□□ 0.78
TOP1P11387 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 YBX2P1-201ENST00000394192 760 ntBASIC19.94■□□□□ 0.78
TOP1P11387 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.94■□□□□ 0.78
TOP1P11387 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TOP1P11387 AC107918.2-201ENST00000530817 355 ntBASIC19.94■□□□□ 0.78
TOP1P11387 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.94■□□□□ 0.78
TOP1P11387 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TOP1P11387 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TOP1P11387 ACTL9-202ENST00000612068 1252 ntBASIC19.94■□□□□ 0.78
TOP1P11387 AC004877.2-201ENST00000623941 599 ntBASIC19.94■□□□□ 0.78
TOP1P11387 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.94■□□□□ 0.78
TOP1P11387 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.94■□□□□ 0.78
TOP1P11387 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.94■□□□□ 0.78
TOP1P11387 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
TOP1P11387 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP1P11387 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.93■□□□□ 0.78
TOP1P11387 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TOP1P11387 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.93■□□□□ 0.78
TOP1P11387 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TOP1P11387 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.93■□□□□ 0.78
TOP1P11387 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.93■□□□□ 0.78
TOP1P11387 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.93■□□□□ 0.78
TOP1P11387 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TOP1P11387 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TOP1P11387 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.93■□□□□ 0.78
TOP1P11387 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.93■□□□□ 0.78
TOP1P11387 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.93■□□□□ 0.78
TOP1P11387 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.93■□□□□ 0.78
TOP1P11387 AL513190.1-201ENST00000621254 727 ntBASIC19.93■□□□□ 0.78
TOP1P11387 REXO1L3P-201ENST00000622202 1288 ntBASIC19.93■□□□□ 0.78
TOP1P11387 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TOP1P11387 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP1P11387 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TOP1P11387 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TOP1P11387 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
TOP1P11387 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.92■□□□□ 0.78
TOP1P11387 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.92■□□□□ 0.78
TOP1P11387 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TOP1P11387 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP1P11387 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.92■□□□□ 0.78
TOP1P11387 MCCD1P2-201ENST00000423228 335 ntBASIC19.92■□□□□ 0.78
TOP1P11387 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TOP1P11387 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.92■□□□□ 0.78
TOP1P11387 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.92■□□□□ 0.78
TOP1P11387 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms