Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 KRT16P4-201ENST00000453883 522 ntBASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 BX005266.1-201ENST00000473402 457 ntBASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 MIR3652-201ENST00000579335 131 ntBASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 AC092171.3-201ENST00000610122 2651 ntBASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 FRMD8P1-201ENST00000440433 1524 ntBASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 AC124947.2-201ENST00000547118 1133 ntBASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
IGHV3-43DP0DP04 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 AP005117.1-201ENST00000584346 1413 ntBASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 AC079776.2-201ENST00000641154 1609 ntBASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 AC078925.2-201ENST00000624013 1973 ntBASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV3-43DP0DP04 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms