Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SRPRAP08240 TUBB7P-202ENST00000428444 1305 ntBASIC17.11■□□□□ 0.33
SRPRAP08240 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SRPRAP08240 TUBB8P7-204ENST00000567960 1332 ntBASIC17.11■□□□□ 0.33
SRPRAP08240 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SRPRAP08240 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SRPRAP08240 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SRPRAP08240 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.11■□□□□ 0.33
SRPRAP08240 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.11■□□□□ 0.33
SRPRAP08240 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.11■□□□□ 0.33
SRPRAP08240 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SRPRAP08240 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPRAP08240 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPRAP08240 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SRPRAP08240 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPRAP08240 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
SRPRAP08240 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPRAP08240 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
SRPRAP08240 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPRAP08240 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 AC004461.1-201ENST00000412461 403 ntBASIC17.1■□□□□ 0.33
SRPRAP08240 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPRAP08240 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPRAP08240 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPRAP08240 AC022145.2-201ENST00000598203 171 ntBASIC17.1■□□□□ 0.33
SRPRAP08240 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.1■□□□□ 0.33
SRPRAP08240 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPRAP08240 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPRAP08240 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPRAP08240 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPRAP08240 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPRAP08240 AKAP8P1-201ENST00000434743 1349 ntBASIC17.1■□□□□ 0.33
SRPRAP08240 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.1■□□□□ 0.33
SRPRAP08240 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SRPRAP08240 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.1■□□□□ 0.33
SRPRAP08240 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRPRAP08240 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SRPRAP08240 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 LTB4R2-202ENST00000528054 3092 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.09■□□□□ 0.33
SRPRAP08240 RNU1-129P-201ENST00000384064 167 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 PMS2P4-201ENST00000412466 1052 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 AC092474.2-201ENST00000424288 719 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 SPDYE11-202ENST00000450699 704 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.09■□□□□ 0.33
SRPRAP08240 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 RN7SL589P-201ENST00000481268 310 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SRPRAP08240 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRPRAP08240 RARRES2P8-201ENST00000566335 367 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.09■□□□□ 0.33
SRPRAP08240 SPDYE9P-201ENST00000570642 692 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 U1.21-201ENST00000580816 167 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 SPDYE10P-202ENST00000612005 668 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 SPDYE8P-202ENST00000612377 668 ntBASIC17.09■□□□□ 0.33
SRPRAP08240 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRPRAP08240 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.09■□□□□ 0.33
SRPRAP08240 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRPRAP08240 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SRPRAP08240 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.09■□□□□ 0.33
SRPRAP08240 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRPRAP08240 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRPRAP08240 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.09■□□□□ 0.33
SRPRAP08240 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRPRAP08240 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
SRPRAP08240 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SRPRAP08240 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SRPRAP08240 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SRPRAP08240 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRPRAP08240 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRPRAP08240 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.08■□□□□ 0.33
SRPRAP08240 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRPRAP08240 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRPRAP08240 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms