Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSDP07339 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSDP07339 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSDP07339 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSDP07339 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSDP07339 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSDP07339 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSDP07339 PAUPAR-201ENST00000630360 2965 ntBASIC14.16□□□□□ -0.14
CTSDP07339 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 AC009336.1-201ENST00000608941 1553 ntBASIC14.15□□□□□ -0.14
CTSDP07339 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 SPDYE15P-201ENST00000424157 909 ntBASIC14.15□□□□□ -0.14
CTSDP07339 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSDP07339 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSDP07339 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 AC133561.5-201ENST00000635547 218 ntBASIC14.15□□□□□ -0.14
CTSDP07339 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.15□□□□□ -0.14
CTSDP07339 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSDP07339 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSDP07339 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.15□□□□□ -0.15
CTSDP07339 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.15□□□□□ -0.15
CTSDP07339 MST1L-201ENST00000442552 2185 ntBASIC14.15□□□□□ -0.15
CTSDP07339 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.15□□□□□ -0.15
CTSDP07339 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSDP07339 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CTSDP07339 STARP1-201ENST00000397973 869 ntBASIC14.14□□□□□ -0.15
CTSDP07339 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CTSDP07339 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSDP07339 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CTSDP07339 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.14□□□□□ -0.15
CTSDP07339 STK19B-204ENST00000512515 211 ntBASIC14.14□□□□□ -0.15
CTSDP07339 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms