Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RB1P06400 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.84■□□□□ 0.45
RB1P06400 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.84■□□□□ 0.45
RB1P06400 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RB1P06400 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RB1P06400 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.84■□□□□ 0.45
RB1P06400 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.84■□□□□ 0.45
RB1P06400 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.84■□□□□ 0.45
RB1P06400 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
RB1P06400 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.84■□□□□ 0.45
RB1P06400 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.84■□□□□ 0.45
RB1P06400 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.84■□□□□ 0.45
RB1P06400 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RB1P06400 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RB1P06400 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RB1P06400 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RB1P06400 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RB1P06400 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
RB1P06400 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RB1P06400 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RB1P06400 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
RB1P06400 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RB1P06400 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RB1P06400 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.83■□□□□ 0.45
RB1P06400 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RB1P06400 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RB1P06400 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RB1P06400 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RB1P06400 AC098614.1-201ENST00000368528 745 ntBASIC17.83■□□□□ 0.44
RB1P06400 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RB1P06400 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RB1P06400 HLA-H-201ENST00000383620 1096 ntBASIC17.83■□□□□ 0.44
RB1P06400 ARSEP1-201ENST00000420443 635 ntBASIC17.83■□□□□ 0.44
RB1P06400 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.83■□□□□ 0.44
RB1P06400 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.83■□□□□ 0.44
RB1P06400 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RB1P06400 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.83■□□□□ 0.44
RB1P06400 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.83■□□□□ 0.44
RB1P06400 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RB1P06400 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.83■□□□□ 0.44
RB1P06400 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RB1P06400 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RB1P06400 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RB1P06400 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.83■□□□□ 0.44
RB1P06400 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.83■□□□□ 0.44
RB1P06400 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.82■□□□□ 0.44
RB1P06400 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RB1P06400 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RB1P06400 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RB1P06400 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RB1P06400 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RB1P06400 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RB1P06400 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RB1P06400 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.82■□□□□ 0.44
RB1P06400 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RB1P06400 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.82■□□□□ 0.44
RB1P06400 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.82■□□□□ 0.44
RB1P06400 AL353705.2-201ENST00000428243 662 ntBASIC17.82■□□□□ 0.44
RB1P06400 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.82■□□□□ 0.44
RB1P06400 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RB1P06400 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.82■□□□□ 0.44
RB1P06400 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.82■□□□□ 0.44
RB1P06400 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.82■□□□□ 0.44
RB1P06400 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.82■□□□□ 0.44
RB1P06400 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.82■□□□□ 0.44
RB1P06400 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RB1P06400 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RB1P06400 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
RB1P06400 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.82■□□□□ 0.44
RB1P06400 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RB1P06400 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.82■□□□□ 0.44
RB1P06400 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RB1P06400 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RB1P06400 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RB1P06400 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RB1P06400 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.81■□□□□ 0.44
RB1P06400 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.81■□□□□ 0.44
RB1P06400 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 GPR53P-205ENST00000457298 1084 ntBASIC17.81■□□□□ 0.44
RB1P06400 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 AC009407.1-201ENST00000568958 598 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms