Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.23■□□□□ 0.35
HLA-DQB2P05538 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 TOP3BP1-201ENST00000420768 1380 ntBASIC17.23■□□□□ 0.35
HLA-DQB2P05538 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 PKD1P1-201ENST00000458669 6805 ntBASIC17.22■□□□□ 0.35
HLA-DQB2P05538 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 AC079776.4-201ENST00000511039 504 ntBASIC17.22■□□□□ 0.35
HLA-DQB2P05538 RNA5SP415-201ENST00000517246 115 ntBASIC17.22■□□□□ 0.35
HLA-DQB2P05538 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 UNC93B6-202ENST00000528242 690 ntBASIC17.22■□□□□ 0.35
HLA-DQB2P05538 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB2P05538 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 MRPL20P1-201ENST00000400819 433 ntBASIC17.21■□□□□ 0.35
HLA-DQB2P05538 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 AC009947.1-201ENST00000444350 727 ntBASIC17.21■□□□□ 0.35
HLA-DQB2P05538 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB2P05538 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQB2P05538 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQB2P05538 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.21■□□□□ 0.34
HLA-DQB2P05538 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 AL391256.1-201ENST00000443260 1855 ntBASIC17.2■□□□□ 0.34
HLA-DQB2P05538 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms