Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
ZBED1O96006 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.98■□□□□ 0.47
ZBED1O96006 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.98■□□□□ 0.47
ZBED1O96006 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.98■□□□□ 0.47
ZBED1O96006 AC004790.2-201ENST00000623588 572 ntBASIC17.98■□□□□ 0.47
ZBED1O96006 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZBED1O96006 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.98■□□□□ 0.47
ZBED1O96006 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZBED1O96006 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZBED1O96006 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.98■□□□□ 0.47
ZBED1O96006 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ZBED1O96006 AL121761.2-201ENST00000598007 1648 ntBASIC17.98■□□□□ 0.47
ZBED1O96006 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ZBED1O96006 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.97■□□□□ 0.47
ZBED1O96006 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.97■□□□□ 0.47
ZBED1O96006 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 LINC02012-201ENST00000608206 1725 ntBASIC17.97■□□□□ 0.47
ZBED1O96006 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZBED1O96006 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZBED1O96006 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ZBED1O96006 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
ZBED1O96006 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.96■□□□□ 0.47
ZBED1O96006 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.96■□□□□ 0.47
ZBED1O96006 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 MRPL20P1-201ENST00000400819 433 ntBASIC17.96■□□□□ 0.47
ZBED1O96006 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZBED1O96006 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.96■□□□□ 0.47
ZBED1O96006 PRSS29P-201ENST00000440800 595 ntBASIC17.96■□□□□ 0.47
ZBED1O96006 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZBED1O96006 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.96■□□□□ 0.47
ZBED1O96006 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 MIR4751-201ENST00000578027 74 ntBASIC17.96■□□□□ 0.47
ZBED1O96006 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.96■□□□□ 0.47
ZBED1O96006 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZBED1O96006 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ZBED1O96006 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.95■□□□□ 0.46
ZBED1O96006 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ZBED1O96006 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
ZBED1O96006 MIR574-201ENST00000385209 96 ntBASIC17.95■□□□□ 0.46
ZBED1O96006 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.95■□□□□ 0.46
ZBED1O96006 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.95■□□□□ 0.46
ZBED1O96006 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.95■□□□□ 0.46
ZBED1O96006 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.95■□□□□ 0.46
ZBED1O96006 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
ZBED1O96006 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
ZBED1O96006 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZBED1O96006 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZBED1O96006 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZBED1O96006 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZBED1O96006 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms