Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP3BO95985 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.45■□□□□ 0.38
TOP3BO95985 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
TOP3BO95985 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP3BO95985 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 SLC25A1P3-201ENST00000395415 828 ntBASIC17.45■□□□□ 0.38
TOP3BO95985 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP3BO95985 AC009947.1-201ENST00000444350 727 ntBASIC17.45■□□□□ 0.38
TOP3BO95985 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.45■□□□□ 0.38
TOP3BO95985 ALG1L5P-201ENST00000482043 771 ntBASIC17.45■□□□□ 0.38
TOP3BO95985 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP3BO95985 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.45■□□□□ 0.38
TOP3BO95985 AC105339.3-201ENST00000560043 636 ntBASIC17.45■□□□□ 0.38
TOP3BO95985 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.45■□□□□ 0.38
TOP3BO95985 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.45■□□□□ 0.38
TOP3BO95985 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP3BO95985 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TOP3BO95985 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP3BO95985 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TOP3BO95985 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.44■□□□□ 0.38
TOP3BO95985 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
TOP3BO95985 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.44■□□□□ 0.38
TOP3BO95985 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 AC092171.3-201ENST00000610122 2651 ntBASIC17.44■□□□□ 0.38
TOP3BO95985 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.44■□□□□ 0.38
TOP3BO95985 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.44■□□□□ 0.38
TOP3BO95985 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TOP3BO95985 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.44■□□□□ 0.38
TOP3BO95985 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TOP3BO95985 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.44■□□□□ 0.38
TOP3BO95985 MIR4469-201ENST00000583919 79 ntBASIC17.44■□□□□ 0.38
TOP3BO95985 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.44■□□□□ 0.38
TOP3BO95985 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 AL356309.3-201ENST00000624132 1934 ntBASIC17.44■□□□□ 0.38
TOP3BO95985 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TOP3BO95985 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TOP3BO95985 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.44■□□□□ 0.38
TOP3BO95985 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.44■□□□□ 0.38
TOP3BO95985 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.44■□□□□ 0.38
TOP3BO95985 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.44■□□□□ 0.38
TOP3BO95985 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.44■□□□□ 0.38
TOP3BO95985 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TOP3BO95985 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.44■□□□□ 0.38
TOP3BO95985 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP3BO95985 RNF216P1-203ENST00000404404 2427 ntBASIC17.43■□□□□ 0.38
TOP3BO95985 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.43■□□□□ 0.38
TOP3BO95985 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP3BO95985 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.43■□□□□ 0.38
TOP3BO95985 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.43■□□□□ 0.38
TOP3BO95985 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.43■□□□□ 0.38
TOP3BO95985 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.43■□□□□ 0.38
TOP3BO95985 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TOP3BO95985 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP3BO95985 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.43■□□□□ 0.38
TOP3BO95985 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.43■□□□□ 0.38
TOP3BO95985 AC005829.1-201ENST00000570002 483 ntBASIC17.43■□□□□ 0.38
TOP3BO95985 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.43■□□□□ 0.38
TOP3BO95985 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.43■□□□□ 0.38
TOP3BO95985 AC011467.4-201ENST00000594891 528 ntBASIC17.43■□□□□ 0.38
TOP3BO95985 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP3BO95985 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms