Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC22.21■■□□□ 1.15
LTN1O94822 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LTN1O94822 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC22.21■■□□□ 1.15
LTN1O94822 AL512638.1-201ENST00000457493 794 ntBASIC22.21■■□□□ 1.15
LTN1O94822 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC22.21■■□□□ 1.15
LTN1O94822 CDK4-206ENST00000549606 558 ntTSL 2 BASIC22.21■■□□□ 1.15
LTN1O94822 AL596325.1-201ENST00000563991 1082 ntBASIC22.21■■□□□ 1.15
LTN1O94822 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC22.21■■□□□ 1.15
LTN1O94822 AC140912.1-201ENST00000577171 1054 ntBASIC22.21■■□□□ 1.15
LTN1O94822 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC22.21■■□□□ 1.15
LTN1O94822 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LTN1O94822 RAB34-223ENST00000636154 730 ntTSL 2 BASIC22.21■■□□□ 1.15
LTN1O94822 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LTN1O94822 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
LTN1O94822 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LTN1O94822 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC22.21■■□□□ 1.15
LTN1O94822 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.21■■□□□ 1.15
LTN1O94822 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
LTN1O94822 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC22.21■■□□□ 1.15
LTN1O94822 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
LTN1O94822 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC22.21■■□□□ 1.15
LTN1O94822 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
LTN1O94822 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
LTN1O94822 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
LTN1O94822 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC22.2■■□□□ 1.15
LTN1O94822 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
LTN1O94822 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 OR8S1-201ENST00000310194 1080 ntBASIC22.2■■□□□ 1.14
LTN1O94822 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 HLA-V-204ENST00000476601 1289 ntBASIC22.2■■□□□ 1.14
LTN1O94822 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
LTN1O94822 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC22.2■■□□□ 1.14
LTN1O94822 COQ6-210ENST00000554920 649 ntTSL 3 BASIC22.2■■□□□ 1.14
LTN1O94822 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC22.2■■□□□ 1.14
LTN1O94822 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 AL662799.1-202ENST00000614205 422 ntBASIC22.2■■□□□ 1.14
LTN1O94822 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC22.2■■□□□ 1.14
LTN1O94822 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC22.2■■□□□ 1.14
LTN1O94822 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC22.2■■□□□ 1.14
LTN1O94822 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
LTN1O94822 CENPM-206ENST00000407253 818 ntTSL 2 BASIC22.2■■□□□ 1.14
LTN1O94822 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC22.2■■□□□ 1.14
LTN1O94822 AC244107.1-201ENST00000442033 332 ntBASIC22.2■■□□□ 1.14
LTN1O94822 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC22.2■■□□□ 1.14
LTN1O94822 ZNF890P-202ENST00000530367 1156 ntBASIC22.2■■□□□ 1.14
LTN1O94822 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC22.2■■□□□ 1.14
LTN1O94822 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTN1O94822 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.19■■□□□ 1.14
LTN1O94822 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC22.19■■□□□ 1.14
LTN1O94822 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
LTN1O94822 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
LTN1O94822 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC22.19■■□□□ 1.14
LTN1O94822 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
LTN1O94822 SPDYE18-201ENST00000510091 1050 ntBASIC22.19■■□□□ 1.14
LTN1O94822 LITAF-210ENST00000571976 548 ntTSL 2 BASIC22.19■■□□□ 1.14
LTN1O94822 LITAF-214ENST00000574703 486 ntTSL 2 BASIC22.19■■□□□ 1.14
LTN1O94822 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
LTN1O94822 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC22.19■■□□□ 1.14
LTN1O94822 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
LTN1O94822 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
LTN1O94822 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC22.19■■□□□ 1.14
LTN1O94822 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC22.19■■□□□ 1.14
LTN1O94822 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTN1O94822 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LTN1O94822 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC22.18■■□□□ 1.14
LTN1O94822 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
LTN1O94822 RPL37AP1-201ENST00000412502 279 ntBASIC22.18■■□□□ 1.14
LTN1O94822 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC22.18■■□□□ 1.14
LTN1O94822 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC22.18■■□□□ 1.14
LTN1O94822 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
LTN1O94822 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms