Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDKL5O76039 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDKL5O76039 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 TOP3BP1-201ENST00000420768 1380 ntBASIC19.75■□□□□ 0.75
CDKL5O76039 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL5O76039 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.75■□□□□ 0.75
CDKL5O76039 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.75■□□□□ 0.75
CDKL5O76039 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.75■□□□□ 0.75
CDKL5O76039 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 AC087163.2-201ENST00000457299 853 ntBASIC19.75■□□□□ 0.75
CDKL5O76039 RPS15P9-201ENST00000494093 319 ntBASIC19.75■□□□□ 0.75
CDKL5O76039 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.75■□□□□ 0.75
CDKL5O76039 KRT126P-201ENST00000549467 1181 ntBASIC19.75■□□□□ 0.75
CDKL5O76039 GGTLC5P-201ENST00000617623 998 ntBASIC19.75■□□□□ 0.75
CDKL5O76039 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL5O76039 LINC00895-201ENST00000629028 1637 ntBASIC19.75■□□□□ 0.75
CDKL5O76039 RNF216P1-203ENST00000404404 2427 ntBASIC19.75■□□□□ 0.75
CDKL5O76039 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDKL5O76039 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CDKL5O76039 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL5O76039 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.75■□□□□ 0.75
CDKL5O76039 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.75■□□□□ 0.75
CDKL5O76039 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CDKL5O76039 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CDKL5O76039 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDKL5O76039 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 AC073621.1-201ENST00000392730 636 ntBASIC19.74■□□□□ 0.75
CDKL5O76039 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.74■□□□□ 0.75
CDKL5O76039 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDKL5O76039 PGM5P2-202ENST00000637225 1043 ntBASIC19.74■□□□□ 0.75
CDKL5O76039 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.74■□□□□ 0.75
CDKL5O76039 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDKL5O76039 CROCCP1-201ENST00000426910 5675 ntBASIC19.74■□□□□ 0.75
CDKL5O76039 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL5O76039 FLJ38576-201ENST00000623820 2459 ntBASIC19.74■□□□□ 0.75
CDKL5O76039 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.74■□□□□ 0.75
CDKL5O76039 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL5O76039 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 AL391256.1-201ENST00000443260 1855 ntBASIC19.73■□□□□ 0.75
CDKL5O76039 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL5O76039 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CDKL5O76039 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL5O76039 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL5O76039 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL5O76039 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.73■□□□□ 0.75
CDKL5O76039 AC079781.3-201ENST00000449110 356 ntBASIC19.73■□□□□ 0.75
CDKL5O76039 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms