Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCN2BO60939 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SCN2BO60939 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
SCN2BO60939 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN2BO60939 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.15■□□□□ 0.18
SCN2BO60939 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN2BO60939 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN2BO60939 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.15■□□□□ 0.18
SCN2BO60939 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.15■□□□□ 0.18
SCN2BO60939 MIR5100-201ENST00000579544 119 ntBASIC16.15■□□□□ 0.18
SCN2BO60939 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.15■□□□□ 0.18
SCN2BO60939 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.15■□□□□ 0.18
SCN2BO60939 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN2BO60939 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCN2BO60939 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 AC079776.2-201ENST00000641154 1609 ntBASIC16.15■□□□□ 0.18
SCN2BO60939 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SCN2BO60939 TUBB8P12-201ENST00000308911 1335 ntBASIC16.15■□□□□ 0.18
SCN2BO60939 TUBB7P-202ENST00000428444 1305 ntBASIC16.15■□□□□ 0.18
SCN2BO60939 TUBB8P7-204ENST00000567960 1332 ntBASIC16.15■□□□□ 0.18
SCN2BO60939 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SCN2BO60939 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN2BO60939 PCDH8P1-201ENST00000428983 2773 ntBASIC16.15■□□□□ 0.18
SCN2BO60939 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
SCN2BO60939 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.14■□□□□ 0.18
SCN2BO60939 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SCN2BO60939 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN2BO60939 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN2BO60939 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
SCN2BO60939 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SCN2BO60939 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN2BO60939 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN2BO60939 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN2BO60939 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.14■□□□□ 0.17
SCN2BO60939 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.14■□□□□ 0.17
SCN2BO60939 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN2BO60939 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN2BO60939 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN2BO60939 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN2BO60939 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 AC097637.2-201ENST00000624096 1997 ntBASIC16.14■□□□□ 0.17
SCN2BO60939 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SCN2BO60939 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN2BO60939 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN2BO60939 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN2BO60939 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SCN2BO60939 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.13■□□□□ 0.17
SCN2BO60939 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.13■□□□□ 0.17
SCN2BO60939 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.13■□□□□ 0.17
SCN2BO60939 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SCN2BO60939 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SCN2BO60939 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SCN2BO60939 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.13■□□□□ 0.17
SCN2BO60939 LINC00982-205ENST00000420957 435 ntBASIC16.13■□□□□ 0.17
SCN2BO60939 ATP5G2P1-201ENST00000433580 426 ntBASIC16.13■□□□□ 0.17
SCN2BO60939 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.13■□□□□ 0.17
SCN2BO60939 AC104819.1-201ENST00000504587 486 ntBASIC16.13■□□□□ 0.17
SCN2BO60939 AP000867.3-201ENST00000524675 377 ntBASIC16.13■□□□□ 0.17
SCN2BO60939 AC012615.1-201ENST00000565797 1299 ntBASIC16.13■□□□□ 0.17
SCN2BO60939 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.13■□□□□ 0.17
SCN2BO60939 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.13■□□□□ 0.17
SCN2BO60939 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN2BO60939 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms