Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 AC022145.2-201ENST00000598203 171 ntBASIC16.87■□□□□ 0.29
PCDHGA12O60330 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 AC093512.1-201ENST00000617969 520 ntBASIC16.86■□□□□ 0.29
PCDHGA12O60330 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA12O60330 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA12O60330 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA12O60330 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGA12O60330 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 PAWRP1-201ENST00000451083 565 ntBASIC16.84■□□□□ 0.29
PCDHGA12O60330 AL513480.1-201ENST00000451731 511 ntBASIC16.84■□□□□ 0.29
PCDHGA12O60330 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 ACTL9-202ENST00000612068 1252 ntBASIC16.84■□□□□ 0.29
PCDHGA12O60330 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms