Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MTDHP4-201ENST00000600287 670 ntBASIC16.43■□□□□ 0.22
SLC28A2O43868 AC107918.4-202ENST00000641623 219 ntBASIC16.43■□□□□ 0.22
SLC28A2O43868 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC28A2O43868 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC28A2O43868 LYSMD4-203ENST00000378904 2122 ntBASIC16.43■□□□□ 0.22
SLC28A2O43868 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC28A2O43868 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SLC28A2O43868 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SLC28A2O43868 NFIC-211ENST00000641145 8399 ntBASIC16.43■□□□□ 0.22
SLC28A2O43868 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC28A2O43868 AC097374.2-201ENST00000618617 1306 ntBASIC16.43■□□□□ 0.22
SLC28A2O43868 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SLC28A2O43868 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SLC28A2O43868 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.42■□□□□ 0.22
SLC28A2O43868 FER1L4-210ENST00000615531 5998 ntBASIC16.42■□□□□ 0.22
SLC28A2O43868 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 AC138761.1-201ENST00000584393 385 ntBASIC16.42■□□□□ 0.22
SLC28A2O43868 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC28A2O43868 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC28A2O43868 AL035252.4-201ENST00000624174 288 ntBASIC16.42■□□□□ 0.22
SLC28A2O43868 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC28A2O43868 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SLC28A2O43868 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC28A2O43868 AC022211.2-201ENST00000585075 2527 ntBASIC16.42■□□□□ 0.22
SLC28A2O43868 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A2O43868 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SLC28A2O43868 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC28A2O43868 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 AC002310.6-201ENST00000624451 1377 ntBASIC16.41■□□□□ 0.22
SLC28A2O43868 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC28A2O43868 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SLC28A2O43868 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC28A2O43868 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC28A2O43868 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLC28A2O43868 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC28A2O43868 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC28A2O43868 AC190387.1-201ENST00000551683 408 ntBASIC16.41■□□□□ 0.22
SLC28A2O43868 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC28A2O43868 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC28A2O43868 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC28A2O43868 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC28A2O43868 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC28A2O43868 AC093028.1-201ENST00000622998 982 ntBASIC16.41■□□□□ 0.22
SLC28A2O43868 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC28A2O43868 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC28A2O43868 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
SLC28A2O43868 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC28A2O43868 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC28A2O43868 AC096633.1-201ENST00000422446 749 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms