Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MSI1O43347 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.62■□□□□ 0.41
MSI1O43347 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.62■□□□□ 0.41
MSI1O43347 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.62■□□□□ 0.41
MSI1O43347 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.62■□□□□ 0.41
MSI1O43347 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.62■□□□□ 0.41
MSI1O43347 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 AC010327.4-202ENST00000591484 748 ntBASIC17.62■□□□□ 0.41
MSI1O43347 AC023141.13-201ENST00000604991 943 ntBASIC17.62■□□□□ 0.41
MSI1O43347 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.62■□□□□ 0.41
MSI1O43347 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MSI1O43347 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.61■□□□□ 0.41
MSI1O43347 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.61■□□□□ 0.41
MSI1O43347 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 KRT18P13-201ENST00000400056 1290 ntBASIC17.61■□□□□ 0.41
MSI1O43347 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.61■□□□□ 0.41
MSI1O43347 AC004832.2-201ENST00000426397 482 ntBASIC17.61■□□□□ 0.41
MSI1O43347 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.61■□□□□ 0.41
MSI1O43347 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.61■□□□□ 0.41
MSI1O43347 PDPK2P-202ENST00000562415 1191 ntBASIC17.61■□□□□ 0.41
MSI1O43347 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.61■□□□□ 0.41
MSI1O43347 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MSI1O43347 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
MSI1O43347 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MSI1O43347 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
MSI1O43347 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.61■□□□□ 0.41
MSI1O43347 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.61■□□□□ 0.41
MSI1O43347 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MSI1O43347 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.61■□□□□ 0.41
MSI1O43347 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
MSI1O43347 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MSI1O43347 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MSI1O43347 PKD1P1-201ENST00000458669 6805 ntBASIC17.6■□□□□ 0.41
MSI1O43347 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
MSI1O43347 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MSI1O43347 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.6■□□□□ 0.41
MSI1O43347 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MSI1O43347 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.6■□□□□ 0.41
MSI1O43347 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.6■□□□□ 0.41
MSI1O43347 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.6■□□□□ 0.41
MSI1O43347 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.6■□□□□ 0.41
MSI1O43347 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.6■□□□□ 0.41
MSI1O43347 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.6■□□□□ 0.41
MSI1O43347 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.6■□□□□ 0.41
MSI1O43347 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.6■□□□□ 0.41
MSI1O43347 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MSI1O43347 TOP3BP1-201ENST00000420768 1380 ntBASIC17.6■□□□□ 0.41
MSI1O43347 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 SLC22A20-204ENST00000530038 1673 ntBASIC17.6■□□□□ 0.41
MSI1O43347 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.6■□□□□ 0.41
MSI1O43347 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
MSI1O43347 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms