Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRGAP3O43295 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SRGAP3O43295 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SRGAP3O43295 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRGAP3O43295 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRGAP3O43295 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 BCAR1-209ENST00000546196 1340 ntBASIC21.05■□□□□ 0.96
SRGAP3O43295 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SRGAP3O43295 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SRGAP3O43295 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 AC025580.3-201ENST00000617932 1424 ntBASIC21.05■□□□□ 0.96
SRGAP3O43295 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SRGAP3O43295 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.05■□□□□ 0.96
SRGAP3O43295 KRT19P2-202ENST00000557173 1012 ntBASIC21.05■□□□□ 0.96
SRGAP3O43295 AC040169.1-201ENST00000565382 521 ntBASIC21.05■□□□□ 0.96
SRGAP3O43295 AC005412.3-201ENST00000580309 715 ntBASIC21.05■□□□□ 0.96
SRGAP3O43295 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SRGAP3O43295 AC023141.13-201ENST00000604991 943 ntBASIC21.05■□□□□ 0.96
SRGAP3O43295 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
SRGAP3O43295 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SRGAP3O43295 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SRGAP3O43295 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.05■□□□□ 0.96
SRGAP3O43295 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRGAP3O43295 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SRGAP3O43295 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.04■□□□□ 0.96
SRGAP3O43295 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.04■□□□□ 0.96
SRGAP3O43295 MPDU1-223ENST00000582151 728 ntBASIC21.04■□□□□ 0.96
SRGAP3O43295 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.04■□□□□ 0.96
SRGAP3O43295 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.04■□□□□ 0.96
SRGAP3O43295 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.04■□□□□ 0.96
SRGAP3O43295 AL353732.1-201ENST00000569618 1459 ntBASIC21.04■□□□□ 0.96
SRGAP3O43295 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.04■□□□□ 0.96
SRGAP3O43295 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 AC105020.1-201ENST00000435356 2205 ntBASIC21.04■□□□□ 0.96
SRGAP3O43295 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRGAP3O43295 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SRGAP3O43295 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.03■□□□□ 0.96
SRGAP3O43295 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP3O43295 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP3O43295 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.03■□□□□ 0.96
SRGAP3O43295 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP3O43295 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SRGAP3O43295 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.03■□□□□ 0.96
SRGAP3O43295 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.03■□□□□ 0.96
SRGAP3O43295 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.03■□□□□ 0.96
SRGAP3O43295 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
SRGAP3O43295 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.03■□□□□ 0.96
SRGAP3O43295 AC007064.4-201ENST00000637740 555 ntBASIC21.03■□□□□ 0.96
SRGAP3O43295 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP3O43295 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP3O43295 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP3O43295 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP3O43295 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP3O43295 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP3O43295 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP3O43295 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.02■□□□□ 0.96
SRGAP3O43295 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP3O43295 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.02■□□□□ 0.96
SRGAP3O43295 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.02■□□□□ 0.96
SRGAP3O43295 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP3O43295 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.02■□□□□ 0.96
SRGAP3O43295 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.02■□□□□ 0.96
SRGAP3O43295 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SRGAP3O43295 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.02■□□□□ 0.96
SRGAP3O43295 AC091167.2-201ENST00000579581 588 ntBASIC21.02■□□□□ 0.96
SRGAP3O43295 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP3O43295 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
SRGAP3O43295 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP3O43295 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP3O43295 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
SRGAP3O43295 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.02■□□□□ 0.95
SRGAP3O43295 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SRGAP3O43295 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
SRGAP3O43295 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms