Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH17O14917 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PCDH17O14917 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDH17O14917 RNA5SP415-201ENST00000517246 115 ntBASIC16.27■□□□□ 0.2
PCDH17O14917 AC092865.5-201ENST00000545435 363 ntBASIC16.27■□□□□ 0.2
PCDH17O14917 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH17O14917 TERC-201ENST00000602385 541 ntBASIC16.27■□□□□ 0.2
PCDH17O14917 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDH17O14917 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH17O14917 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH17O14917 AC060834.1-201ENST00000443027 2032 ntBASIC16.27■□□□□ 0.2
PCDH17O14917 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH17O14917 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PCDH17O14917 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDH17O14917 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDH17O14917 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDH17O14917 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDH17O14917 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH17O14917 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH17O14917 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
PCDH17O14917 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH17O14917 LYSMD4-203ENST00000378904 2122 ntBASIC16.26■□□□□ 0.19
PCDH17O14917 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PCDH17O14917 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 MIR1233-2-201ENST00000408138 82 ntBASIC16.26■□□□□ 0.19
PCDH17O14917 MIR1233-1-201ENST00000408722 82 ntBASIC16.26■□□□□ 0.19
PCDH17O14917 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.26■□□□□ 0.19
PCDH17O14917 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDH17O14917 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 AL805961.1-202ENST00000641562 540 ntBASIC16.26■□□□□ 0.19
PCDH17O14917 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDH17O14917 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDH17O14917 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDH17O14917 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH17O14917 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDH17O14917 AC104109.2-201ENST00000602919 1418 ntBASIC16.26■□□□□ 0.19
PCDH17O14917 AC148477.5-201ENST00000625164 1645 ntBASIC16.26■□□□□ 0.19
PCDH17O14917 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH17O14917 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH17O14917 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDH17O14917 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH17O14917 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH17O14917 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDH17O14917 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH17O14917 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH17O14917 UNC93B6-202ENST00000528242 690 ntBASIC16.25■□□□□ 0.19
PCDH17O14917 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDH17O14917 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDH17O14917 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms