Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC26.98■■□□□ 1.91
CHD1O14646 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC26.98■■□□□ 1.91
CHD1O14646 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1O14646 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1O14646 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
CHD1O14646 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1O14646 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.97■■□□□ 1.91
CHD1O14646 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1O14646 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC26.97■■□□□ 1.91
CHD1O14646 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
CHD1O14646 CALR4P-201ENST00000431943 946 ntBASIC26.97■■□□□ 1.91
CHD1O14646 AC105129.2-201ENST00000559536 390 ntBASIC26.97■■□□□ 1.91
CHD1O14646 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1O14646 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
CHD1O14646 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1O14646 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1O14646 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1O14646 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1O14646 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1O14646 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC26.96■■□□□ 1.91
CHD1O14646 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD1O14646 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC26.96■■□□□ 1.91
CHD1O14646 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC26.96■■□□□ 1.91
CHD1O14646 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD1O14646 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC26.96■■□□□ 1.91
CHD1O14646 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC26.96■■□□□ 1.91
CHD1O14646 AC061975.2-201ENST00000581722 295 ntBASIC26.96■■□□□ 1.91
CHD1O14646 MPDU1-223ENST00000582151 728 ntBASIC26.96■■□□□ 1.91
CHD1O14646 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
CHD1O14646 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC26.96■■□□□ 1.91
CHD1O14646 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CHD1O14646 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD1O14646 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
CHD1O14646 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD1O14646 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD1O14646 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CHD1O14646 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CHD1O14646 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC26.96■■□□□ 1.91
CHD1O14646 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
CHD1O14646 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC26.96■■□□□ 1.91
CHD1O14646 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC26.96■■□□□ 1.91
CHD1O14646 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC26.96■■□□□ 1.91
CHD1O14646 SDHAP3-202ENST00000515467 728 ntBASIC26.96■■□□□ 1.91
CHD1O14646 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC26.96■■□□□ 1.91
CHD1O14646 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC26.96■■□□□ 1.91
CHD1O14646 ABBA01031663.1-201ENST00000635630 790 ntBASIC26.96■■□□□ 1.91
CHD1O14646 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
CHD1O14646 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD1O14646 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CHD1O14646 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CHD1O14646 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHD1O14646 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHD1O14646 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHD1O14646 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC26.95■■□□□ 1.9
CHD1O14646 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC26.95■■□□□ 1.9
CHD1O14646 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHD1O14646 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC26.95■■□□□ 1.9
CHD1O14646 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CHD1O14646 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CHD1O14646 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHD1O14646 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC26.95■■□□□ 1.9
CHD1O14646 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC26.95■■□□□ 1.9
CHD1O14646 AC098859.1-201ENST00000502915 1238 ntBASIC26.95■■□□□ 1.9
CHD1O14646 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC26.95■■□□□ 1.9
CHD1O14646 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC26.95■■□□□ 1.9
CHD1O14646 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CHD1O14646 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC26.95■■□□□ 1.9
CHD1O14646 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHD1O14646 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.94■■□□□ 1.9
CHD1O14646 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC26.94■■□□□ 1.9
CHD1O14646 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC26.94■■□□□ 1.9
CHD1O14646 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC26.94■■□□□ 1.9
CHD1O14646 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CHD1O14646 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CHD1O14646 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CHD1O14646 KRT8P49-201ENST00000604166 1432 ntBASIC26.94■■□□□ 1.9
CHD1O14646 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC26.93■■□□□ 1.9
CHD1O14646 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHD1O14646 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHD1O14646 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC26.93■■□□□ 1.9
CHD1O14646 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC26.93■■□□□ 1.9
CHD1O14646 LOX-206ENST00000639739 1626 ntTSL 5 BASIC26.93■■□□□ 1.9
CHD1O14646 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC26.93■■□□□ 1.9
CHD1O14646 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.93■■□□□ 1.9
CHD1O14646 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHD1O14646 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC26.93■■□□□ 1.9
CHD1O14646 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
CHD1O14646 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC26.93■■□□□ 1.9
CHD1O14646 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHD1O14646 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHD1O14646 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CHD1O14646 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC26.93■■□□□ 1.9
CHD1O14646 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CHD1O14646 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC26.93■■□□□ 1.9
CHD1O14646 NAT9-224ENST00000583757 583 ntTSL 3 BASIC26.93■■□□□ 1.9
CHD1O14646 AL365330.1-201ENST00000607459 531 ntBASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms