Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
UPK1AO00322 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1AO00322 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
UPK1AO00322 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1AO00322 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK1AO00322 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1AO00322 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK1AO00322 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK1AO00322 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK1AO00322 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK1AO00322 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
UPK1AO00322 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
UPK1AO00322 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK1AO00322 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK1AO00322 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK1AO00322 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1AO00322 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1AO00322 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
UPK1AO00322 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK1AO00322 AC103702.1-201ENST00000548801 2630 ntBASIC16.13■□□□□ 0.17
UPK1AO00322 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK1AO00322 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 RBM17P3-201ENST00000417687 1192 ntBASIC16.13■□□□□ 0.17
UPK1AO00322 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.13■□□□□ 0.17
UPK1AO00322 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.13■□□□□ 0.17
UPK1AO00322 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.13■□□□□ 0.17
UPK1AO00322 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK1AO00322 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.13■□□□□ 0.17
UPK1AO00322 CLEC4GP1-201ENST00000596555 870 ntBASIC16.13■□□□□ 0.17
UPK1AO00322 AC012313.10-201ENST00000623509 926 ntBASIC16.13■□□□□ 0.17
UPK1AO00322 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK1AO00322 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1AO00322 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1AO00322 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1AO00322 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UPK1AO00322 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UPK1AO00322 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK1AO00322 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK1AO00322 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
UPK1AO00322 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK1AO00322 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
UPK1AO00322 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
UPK1AO00322 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1AO00322 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
UPK1AO00322 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UPK1AO00322 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.12■□□□□ 0.17
UPK1AO00322 ACTG1P4-201ENST00000425123 1122 ntBASIC16.12■□□□□ 0.17
UPK1AO00322 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1AO00322 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 AC097637.2-201ENST00000624096 1997 ntBASIC16.12■□□□□ 0.17
UPK1AO00322 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
UPK1AO00322 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1AO00322 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms