Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.69■□□□□ 0.26
CDC7O00311 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC7O00311 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC7O00311 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.69■□□□□ 0.26
CDC7O00311 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.69■□□□□ 0.26
CDC7O00311 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.69■□□□□ 0.26
CDC7O00311 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.69■□□□□ 0.26
CDC7O00311 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC7O00311 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.69■□□□□ 0.26
CDC7O00311 AL139424.1-201ENST00000607572 797 ntBASIC16.69■□□□□ 0.26
CDC7O00311 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.69■□□□□ 0.26
CDC7O00311 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDC7O00311 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.69■□□□□ 0.26
CDC7O00311 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CDC7O00311 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC7O00311 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDC7O00311 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.69■□□□□ 0.26
CDC7O00311 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC7O00311 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDC7O00311 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC7O00311 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CDC7O00311 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDC7O00311 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDC7O00311 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC7O00311 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDC7O00311 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC7O00311 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDC7O00311 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDC7O00311 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC7O00311 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.68■□□□□ 0.26
CDC7O00311 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDC7O00311 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CDC7O00311 SAPCD2P3-201ENST00000455031 850 ntBASIC16.68■□□□□ 0.26
CDC7O00311 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.68■□□□□ 0.26
CDC7O00311 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDC7O00311 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDC7O00311 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.68■□□□□ 0.26
CDC7O00311 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CDC7O00311 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDC7O00311 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC7O00311 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC7O00311 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 HLA-A-202ENST00000376806 1854 ntBASIC16.67■□□□□ 0.26
CDC7O00311 AL391256.1-201ENST00000443260 1855 ntBASIC16.67■□□□□ 0.26
CDC7O00311 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 AL021920.2-201ENST00000624828 1351 ntBASIC16.67■□□□□ 0.26
CDC7O00311 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC7O00311 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC7O00311 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC7O00311 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC7O00311 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC7O00311 UNC93B7-201ENST00000509439 705 ntBASIC16.67■□□□□ 0.26
CDC7O00311 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC7O00311 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC7O00311 AC139887.3-201ENST00000568585 713 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms