Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.06■□□□□ 0.16
CLIC1O00299 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.06■□□□□ 0.16
CLIC1O00299 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.06■□□□□ 0.16
CLIC1O00299 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLIC1O00299 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.06■□□□□ 0.16
CLIC1O00299 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
CLIC1O00299 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLIC1O00299 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.06■□□□□ 0.16
CLIC1O00299 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CLIC1O00299 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.06■□□□□ 0.16
CLIC1O00299 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.06■□□□□ 0.16
CLIC1O00299 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.06■□□□□ 0.16
CLIC1O00299 DRAXINP1-201ENST00000437611 948 ntBASIC16.06■□□□□ 0.16
CLIC1O00299 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.06■□□□□ 0.16
CLIC1O00299 KRT17P6-201ENST00000453795 1220 ntBASIC16.06■□□□□ 0.16
CLIC1O00299 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.06■□□□□ 0.16
CLIC1O00299 FAM86EP-206ENST00000510506 987 ntBASIC16.06■□□□□ 0.16
CLIC1O00299 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.06■□□□□ 0.16
CLIC1O00299 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CLIC1O00299 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.06■□□□□ 0.16
CLIC1O00299 BNIP3P18-201ENST00000593976 575 ntBASIC16.06■□□□□ 0.16
CLIC1O00299 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
CLIC1O00299 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.06■□□□□ 0.16
CLIC1O00299 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CLIC1O00299 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLIC1O00299 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 NSUN5P1-202ENST00000421140 1535 ntBASIC16.05■□□□□ 0.16
CLIC1O00299 NSUN5P2-203ENST00000457352 1529 ntBASIC16.05■□□□□ 0.16
CLIC1O00299 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.05■□□□□ 0.16
CLIC1O00299 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.05■□□□□ 0.16
CLIC1O00299 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.05■□□□□ 0.16
CLIC1O00299 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CLIC1O00299 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
CLIC1O00299 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.05■□□□□ 0.16
CLIC1O00299 TPSP2-201ENST00000561760 610 ntBASIC16.05■□□□□ 0.16
CLIC1O00299 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 AC116407.4-201ENST00000623319 1061 ntBASIC16.05■□□□□ 0.16
CLIC1O00299 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 AP000867.4-201ENST00000641616 219 ntBASIC16.05■□□□□ 0.16
CLIC1O00299 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.05■□□□□ 0.16
CLIC1O00299 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 FER1L4-210ENST00000615531 5998 ntBASIC16.05■□□□□ 0.16
CLIC1O00299 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLIC1O00299 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.05■□□□□ 0.16
CLIC1O00299 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLIC1O00299 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLIC1O00299 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 AC092364.2-201ENST00000596710 2692 ntBASIC16.04■□□□□ 0.16
CLIC1O00299 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLIC1O00299 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
CLIC1O00299 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.04■□□□□ 0.16
CLIC1O00299 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.04■□□□□ 0.16
CLIC1O00299 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CLIC1O00299 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.04■□□□□ 0.16
CLIC1O00299 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLIC1O00299 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLIC1O00299 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms