Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SPDYE11-202ENST00000450699 704 ntBASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 TIMM8BP1-201ENST00000452384 211 ntBASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 RN7SL589P-201ENST00000481268 310 ntBASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SPDYE9P-201ENST00000570642 692 ntBASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC099522.2-201ENST00000607001 744 ntBASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SPDYE10P-202ENST00000612005 668 ntBASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SPDYE8P-202ENST00000612377 668 ntBASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC067852.2-201ENST00000590513 2313 ntBASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.97■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC131009.4-201ENST00000624048 1740 ntBASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 ADH5P3-201ENST00000433842 1137 ntBASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC109635.5-201ENST00000533593 962 ntBASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 DUX4L17-201ENST00000557360 1267 ntBASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 RARRES2P8-201ENST00000566335 367 ntBASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 MPDU1-223ENST00000582151 728 ntBASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AL009183.1-201ENST00000603760 355 ntBASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
C1QTNF3-AMACRE9PGA6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TUBB8P12-201ENST00000308911 1335 ntBASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TUBB7P-202ENST00000428444 1305 ntBASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TUBB8P7-204ENST00000567960 1332 ntBASIC16.96■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC004461.1-201ENST00000412461 403 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms