Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00473A8K010 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00473A8K010 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00473A8K010 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00473A8K010 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00473A8K010 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00473A8K010 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00473A8K010 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC00473A8K010 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LINC00473A8K010 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00473A8K010 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LINC00473A8K010 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00473A8K010 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC00473A8K010 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00473A8K010 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LINC00473A8K010 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
LINC00473A8K010 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LINC00473A8K010 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC00473A8K010 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00473A8K010 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00473A8K010 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC00473A8K010 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 ATP5G2P1-201ENST00000433580 426 ntBASIC13.85□□□□□ -0.19
LINC00473A8K010 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.85□□□□□ -0.19
LINC00473A8K010 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 AL591684.3-201ENST00000605187 298 ntBASIC13.85□□□□□ -0.19
LINC00473A8K010 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
LINC00473A8K010 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
LINC00473A8K010 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00473A8K010 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00473A8K010 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00473A8K010 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC00473A8K010 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC00473A8K010 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00473A8K010 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC00473A8K010 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00473A8K010 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 LINC02199-201ENST00000506655 2702 ntBASIC13.84□□□□□ -0.19
LINC00473A8K010 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LINC00473A8K010 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LINC00473A8K010 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00473A8K010 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00473A8K010 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
LINC00473A8K010 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00473A8K010 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC00473A8K010 AC138894.3-201ENST00000603787 634 ntBASIC13.84□□□□□ -0.19
LINC00473A8K010 AC010331.1-201ENST00000611423 582 ntBASIC13.84□□□□□ -0.19
LINC00473A8K010 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00473A8K010 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LINC00473A8K010 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC00473A8K010 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms