Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
SBNO1A3KN83 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
SBNO1A3KN83 RPL37AP1-201ENST00000412502 279 ntBASIC22.77■■□□□ 1.24
SBNO1A3KN83 MIR4492-201ENST00000581627 80 ntBASIC22.77■■□□□ 1.24
SBNO1A3KN83 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 SLC9A3P2-201ENST00000447821 2021 ntBASIC22.77■■□□□ 1.24
SBNO1A3KN83 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
SBNO1A3KN83 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.77■■□□□ 1.24
SBNO1A3KN83 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
SBNO1A3KN83 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.77■■□□□ 1.24
SBNO1A3KN83 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
SBNO1A3KN83 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.77■■□□□ 1.24
SBNO1A3KN83 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.77■■□□□ 1.24
SBNO1A3KN83 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
SBNO1A3KN83 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 AL080243.2-201ENST00000418783 582 ntBASIC22.76■■□□□ 1.23
SBNO1A3KN83 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 AL353705.2-201ENST00000428243 662 ntBASIC22.76■■□□□ 1.23
SBNO1A3KN83 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SBNO1A3KN83 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 PRYP6-201ENST00000514804 343 ntBASIC22.76■■□□□ 1.23
SBNO1A3KN83 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SBNO1A3KN83 LITAF-210ENST00000571976 548 ntTSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 LITAF-214ENST00000574703 486 ntTSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SBNO1A3KN83 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SBNO1A3KN83 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SBNO1A3KN83 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SBNO1A3KN83 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SBNO1A3KN83 AL390961.4-201ENST00000623958 2535 ntBASIC22.76■■□□□ 1.23
SBNO1A3KN83 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 CDK2AP2P3-201ENST00000422476 372 ntBASIC22.76■■□□□ 1.23
SBNO1A3KN83 DFFBP1-201ENST00000433250 979 ntBASIC22.76■■□□□ 1.23
SBNO1A3KN83 STARD13-205ENST00000439831 945 ntTSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC22.76■■□□□ 1.23
SBNO1A3KN83 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SBNO1A3KN83 LINC00896-202ENST00000609602 2128 ntBASIC22.76■■□□□ 1.23
SBNO1A3KN83 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SBNO1A3KN83 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SBNO1A3KN83 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 NOC2LP1-202ENST00000452600 2235 ntBASIC22.75■■□□□ 1.23
SBNO1A3KN83 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 PGF-202ENST00000405431 666 ntTSL 5 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SBNO1A3KN83 INE1-201ENST00000456273 945 ntBASIC22.75■■□□□ 1.23
SBNO1A3KN83 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 POLE2-203ENST00000553805 496 ntTSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SBNO1A3KN83 AC004790.1-201ENST00000612686 536 ntBASIC22.75■■□□□ 1.23
SBNO1A3KN83 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
SBNO1A3KN83 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC22.74■■□□□ 1.23
SBNO1A3KN83 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SBNO1A3KN83 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SBNO1A3KN83 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SBNO1A3KN83 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
SBNO1A3KN83 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC22.74■■□□□ 1.23
SBNO1A3KN83 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SBNO1A3KN83 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SBNO1A3KN83 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SBNO1A3KN83 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.74■■□□□ 1.23
SBNO1A3KN83 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
SBNO1A3KN83 DGCR5-201ENST00000399539 862 ntBASIC22.74■■□□□ 1.23
SBNO1A3KN83 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC22.74■■□□□ 1.23
SBNO1A3KN83 AL162274.1-201ENST00000617191 1098 ntBASIC22.74■■□□□ 1.23
SBNO1A3KN83 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms