Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TCRBV4S1A1TA0A5B7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.72□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC079776.2-201ENST00000641154 1609 ntBASIC13.72□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AGGF1P2-201ENST00000426656 2106 ntBASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC105339.3-201ENST00000560043 636 ntBASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC008735.5-201ENST00000623544 497 ntBASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC073592.5-201ENST00000624854 528 ntBASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TCRBV4S1A1TA0A5B7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL139384.1-201ENST00000612143 3047 ntBASIC13.71□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TCRBV4S1A1TA0A5B7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.71□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PMPCAP1-201ENST00000508114 1576 ntBASIC13.71□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LAGE3P1-201ENST00000425356 484 ntBASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC002558.1-201ENST00000488906 803 ntBASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 POLD2P1-201ENST00000511220 997 ntBASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MIR1199-201ENST00000621445 119 ntBASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AD001527.2-201ENST00000622994 785 ntBASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC107918.4-202ENST00000641623 219 ntBASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms