Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 AL133373.2-201ENST00000623187 2828 ntBASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV5A0A0B4J1U4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 KRT8P49-201ENST00000604166 1432 ntBASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 TSEN15P1-201ENST00000423257 515 ntBASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 ADH5P3-201ENST00000433842 1137 ntBASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 RARRES2P8-201ENST00000566335 367 ntBASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 AL009183.1-201ENST00000603760 355 ntBASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 LINC02012-201ENST00000608206 1725 ntBASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV5A0A0B4J1U4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 AC131009.4-201ENST00000624048 1740 ntBASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 TFAMP1-201ENST00000412727 736 ntBASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 RN7SL589P-201ENST00000481268 310 ntBASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 MPDU1-223ENST00000582151 728 ntBASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 SLC22A20-204ENST00000530038 1673 ntBASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRGV5A0A0B4J1U4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms