Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 UNC93B6-202ENST00000528242 690 ntBASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 PI4KAP1-204ENST00000612579 1703 ntBASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 GGTLC5P-201ENST00000617623 998 ntBASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 AC005593.1-201ENST00000624894 515 ntBASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 AC080080.1-201ENST00000625121 2420 ntBASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.48■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 PMS2P7-201ENST00000506558 1336 ntBASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TNFSF12-TNFSF13A0A0A6YY99 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms