Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLIC4Q9Y696 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.42■□□□□ 0.7
CLIC4Q9Y696 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC4Q9Y696 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC4Q9Y696 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC4Q9Y696 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLIC4Q9Y696 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLIC4Q9Y696 DOC2GP-204ENST00000639052 2548 ntBASIC19.42■□□□□ 0.7
CLIC4Q9Y696 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 AC092364.2-201ENST00000596710 2692 ntBASIC19.41■□□□□ 0.7
CLIC4Q9Y696 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 AKR1C7P-201ENST00000305623 895 ntBASIC19.41■□□□□ 0.7
CLIC4Q9Y696 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 AL121772.3-201ENST00000610840 674 ntBASIC19.41■□□□□ 0.7
CLIC4Q9Y696 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLIC4Q9Y696 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 AC008608.2-201ENST00000606089 416 ntBASIC19.4■□□□□ 0.7
CLIC4Q9Y696 AL139424.1-201ENST00000607572 797 ntBASIC19.4■□□□□ 0.7
CLIC4Q9Y696 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 AC012313.10-201ENST00000623509 926 ntBASIC19.4■□□□□ 0.7
CLIC4Q9Y696 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.4■□□□□ 0.7
CLIC4Q9Y696 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.4■□□□□ 0.7
CLIC4Q9Y696 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
CLIC4Q9Y696 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLIC4Q9Y696 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLIC4Q9Y696 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLIC4Q9Y696 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLIC4Q9Y696 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 AP002490.2-201ENST00000524791 560 ntBASIC19.39■□□□□ 0.69
CLIC4Q9Y696 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 AC091304.2-201ENST00000564639 760 ntBASIC19.39■□□□□ 0.69
CLIC4Q9Y696 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 MTDHP4-201ENST00000600287 670 ntBASIC19.39■□□□□ 0.69
CLIC4Q9Y696 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 AL021920.2-201ENST00000624828 1351 ntBASIC19.39■□□□□ 0.69
CLIC4Q9Y696 KRT8P49-201ENST00000604166 1432 ntBASIC19.39■□□□□ 0.69
CLIC4Q9Y696 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLIC4Q9Y696 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms