Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 AC023157.3-201ENST00000619086 2088 ntBASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 AC036111.1-201ENST00000533973 1582 ntBASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 AC010491.1-201ENST00000563101 2797 ntBASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 AC026748.1-201ENST00000624349 3251 ntBASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 AL391256.1-201ENST00000443260 1855 ntBASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 AC004264.1-201ENST00000608354 794 ntBASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 AC008622.2-201ENST00000617006 1229 ntBASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms