Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 AC124947.2-201ENST00000547118 1133 ntBASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 NKILA-202ENST00000614771 2598 ntBASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 CRYGEP-201ENST00000412192 528 ntBASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 PRSS29P-201ENST00000440800 595 ntBASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 GGTLC5P-201ENST00000617623 998 ntBASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 AC092053.1-201ENST00000605787 1936 ntBASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A3BPQ9Y5P4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 VN2R19P-201ENST00000442399 1052 ntBASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A3BPQ9Y5P4 PI4KAP1-204ENST00000612579 1703 ntBASIC19.02■□□□□ 0.63
COL4A3BPQ9Y5P4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL4A3BPQ9Y5P4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.02■□□□□ 0.63
COL4A3BPQ9Y5P4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL4A3BPQ9Y5P4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL4A3BPQ9Y5P4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 AC011676.5-201ENST00000624864 2660 ntBASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 KRT18P13-201ENST00000400056 1290 ntBASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 MRPL20P1-201ENST00000400819 433 ntBASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 BX842568.4-201ENST00000421222 227 ntBASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 AC092865.5-201ENST00000545435 363 ntBASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms