Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 ELK2BP-201ENST00000415014 1224 ntBASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 AL031284.1-201ENST00000419297 478 ntBASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 MIR1199-201ENST00000621445 119 ntBASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 PGM5P2-202ENST00000637225 1043 ntBASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 AL805961.1-202ENST00000641562 540 ntBASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 AF228730.7-201ENST00000641842 219 ntBASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB13Q9Y5F0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PCDHB13Q9Y5F0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB13Q9Y5F0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB13Q9Y5F0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB13Q9Y5F0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB13Q9Y5F0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB13Q9Y5F0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 MRPL3P1-201ENST00000400109 1033 ntBASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB13Q9Y5F0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 PAWRP1-201ENST00000451083 565 ntBASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms