Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.63■□□□□ 0.41
SCML2Q9UQR0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML2Q9UQR0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SCML2Q9UQR0 LETM1P2-201ENST00000597330 2178 ntBASIC17.63■□□□□ 0.41
SCML2Q9UQR0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML2Q9UQR0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML2Q9UQR0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.63■□□□□ 0.41
SCML2Q9UQR0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SCML2Q9UQR0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML2Q9UQR0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 CYP2A7P1-201ENST00000595391 815 ntBASIC17.62■□□□□ 0.41
SCML2Q9UQR0 AL009183.1-201ENST00000603760 355 ntBASIC17.62■□□□□ 0.41
SCML2Q9UQR0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SCML2Q9UQR0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 AC060834.1-201ENST00000443027 2032 ntBASIC17.61■□□□□ 0.41
SCML2Q9UQR0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 RNU1-129P-201ENST00000384064 167 ntBASIC17.61■□□□□ 0.41
SCML2Q9UQR0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 AC109635.5-201ENST00000533593 962 ntBASIC17.61■□□□□ 0.41
SCML2Q9UQR0 MIR3909-201ENST00000579518 119 ntBASIC17.61■□□□□ 0.41
SCML2Q9UQR0 U1.21-201ENST00000580816 167 ntBASIC17.61■□□□□ 0.41
SCML2Q9UQR0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 AC013467.2-201ENST00000605472 835 ntBASIC17.61■□□□□ 0.41
SCML2Q9UQR0 AC099522.2-201ENST00000607001 744 ntBASIC17.61■□□□□ 0.41
SCML2Q9UQR0 AC079781.4-201ENST00000641908 219 ntBASIC17.61■□□□□ 0.41
SCML2Q9UQR0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML2Q9UQR0 AP001094.4-201ENST00000579008 2176 ntBASIC17.6■□□□□ 0.41
SCML2Q9UQR0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.6■□□□□ 0.41
SCML2Q9UQR0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 AC006277.1-201ENST00000624348 1610 ntBASIC17.6■□□□□ 0.41
SCML2Q9UQR0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML2Q9UQR0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms