Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 FAM86MP-201ENST00000340703 885 ntBASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 AC004945.1-201ENST00000416738 983 ntBASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 AL353705.2-201ENST00000428243 662 ntBASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 AC135586.1-201ENST00000539323 574 ntBASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 AP000997.3-201ENST00000623333 2250 ntBASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 LTB4R2-202ENST00000528054 3092 ntBASIC20.42■□□□□ 0.86
ZC3H4Q9UPT8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 TTTY23B-201ENST00000442790 549 ntBASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 AL512343.1-201ENST00000605837 169 ntBASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 AC008494.3-201ENST00000606615 944 ntBASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.41■□□□□ 0.86
ZC3H4Q9UPT8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 HLA-H-201ENST00000383620 1096 ntBASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 KRT223P-202ENST00000449164 1292 ntBASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 AL138918.1-201ENST00000568306 659 ntBASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 AC091167.2-201ENST00000579581 588 ntBASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZC3H4Q9UPT8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZC3H4Q9UPT8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.39■□□□□ 0.86
ZC3H4Q9UPT8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 AC092933.1-201ENST00000393644 945 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms