Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 MYCLP1-201ENST00000372451 1075 ntBASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 PTCHD3P3-201ENST00000403073 906 ntBASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 PRSS29P-201ENST00000440800 595 ntBASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 AC092865.6-201ENST00000642101 219 ntBASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 AC002310.6-201ENST00000624451 1377 ntBASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA1Q9UND3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 LINC00982-205ENST00000420957 435 ntBASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 MCCD1P2-201ENST00000423228 335 ntBASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 HCG4B-203ENST00000450128 991 ntBASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 AC005829.1-201ENST00000570002 483 ntBASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 AL596442.2-201ENST00000610240 980 ntBASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 AL805961.1-202ENST00000641562 540 ntBASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA1Q9UND3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms