Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 LAGE3P1-201ENST00000425356 484 ntBASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 TP73-AS1-207ENST00000624167 988 ntBASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA9Q9UGM1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 FAM197Y8-203ENST00000450145 560 ntBASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 AC006557.2-201ENST00000592985 1240 ntBASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 AC078925.2-201ENST00000624013 1973 ntBASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 RNF216P1-203ENST00000404404 2427 ntBASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA9Q9UGM1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 AC079781.3-201ENST00000449110 356 ntBASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 AF186996.4-201ENST00000467186 377 ntBASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 RNPS1P1-201ENST00000507437 918 ntBASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 OR7E14P-202ENST00000530490 1290 ntBASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 AC004706.3-202ENST00000621574 984 ntBASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 AC107918.4-202ENST00000641623 219 ntBASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 UBALD1-205ENST00000590891 2641 ntBASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHRNA9Q9UGM1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms