Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 MIR4497-201ENST00000583208 89 ntBASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 LYSMD4-203ENST00000378904 2122 ntBASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 AC024909.3-201ENST00000611513 2257 ntBASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C12orf4Q9NQ89 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 BX276092.7-203ENST00000637198 1536 ntBASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.89□□□□□ -0.03
C12orf4Q9NQ89 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 AC026691.1-201ENST00000602502 2017 ntBASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 AC009154.2-201ENST00000621177 724 ntBASIC14.88□□□□□ -0.03
C12orf4Q9NQ89 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms