Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 AC079776.2-201ENST00000641154 1609 ntBASIC17.96■□□□□ 0.47
CD248Q9HCU0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CD248Q9HCU0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD248Q9HCU0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 PHGDH-209ENST00000641074 1780 ntBASIC17.95■□□□□ 0.46
CD248Q9HCU0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 AC092910.1-201ENST00000482027 1129 ntBASIC17.95■□□□□ 0.46
CD248Q9HCU0 AC122714.2-201ENST00000502787 707 ntBASIC17.95■□□□□ 0.46
CD248Q9HCU0 RNA5SP415-201ENST00000517246 115 ntBASIC17.95■□□□□ 0.46
CD248Q9HCU0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 FAM197Y3-203ENST00000618346 717 ntBASIC17.95■□□□□ 0.46
CD248Q9HCU0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.95■□□□□ 0.46
CD248Q9HCU0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.95■□□□□ 0.46
CD248Q9HCU0 AGGF1P2-201ENST00000426656 2106 ntBASIC17.95■□□□□ 0.46
CD248Q9HCU0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD248Q9HCU0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.94■□□□□ 0.46
CD248Q9HCU0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 MIR940-201ENST00000401276 94 ntBASIC17.94■□□□□ 0.46
CD248Q9HCU0 BX842568.4-201ENST00000421222 227 ntBASIC17.94■□□□□ 0.46
CD248Q9HCU0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms