Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 AC092474.2-201ENST00000424288 719 ntBASIC17.69■□□□□ 0.42
LRRC3Q9BY71 AL592309.1-201ENST00000443127 649 ntBASIC17.69■□□□□ 0.42
LRRC3Q9BY71 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 AC025678.2-201ENST00000562061 970 ntBASIC17.69■□□□□ 0.42
LRRC3Q9BY71 LINC01225-203ENST00000563550 1244 ntBASIC17.69■□□□□ 0.42
LRRC3Q9BY71 MIR3197-201ENST00000582241 73 ntBASIC17.69■□□□□ 0.42
LRRC3Q9BY71 AC015911.4-201ENST00000588022 1070 ntBASIC17.69■□□□□ 0.42
LRRC3Q9BY71 AC093512.1-201ENST00000617969 520 ntBASIC17.69■□□□□ 0.42
LRRC3Q9BY71 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 AC134043.2-201ENST00000624206 2238 ntBASIC17.68■□□□□ 0.42
LRRC3Q9BY71 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 GPS2P2-201ENST00000430745 888 ntBASIC17.68■□□□□ 0.42
LRRC3Q9BY71 RN7SL589P-201ENST00000481268 310 ntBASIC17.68■□□□□ 0.42
LRRC3Q9BY71 AC069335.1-201ENST00000489972 472 ntBASIC17.68■□□□□ 0.42
LRRC3Q9BY71 AC109635.5-201ENST00000533593 962 ntBASIC17.68■□□□□ 0.42
LRRC3Q9BY71 SPCS2P1-201ENST00000561636 679 ntBASIC17.68■□□□□ 0.42
LRRC3Q9BY71 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 AC093525.9-201ENST00000624961 1746 ntBASIC17.68■□□□□ 0.42
LRRC3Q9BY71 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC3Q9BY71 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 AC116353.5-201ENST00000638148 1699 ntBASIC17.67■□□□□ 0.42
LRRC3Q9BY71 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 TOP3BP1-201ENST00000420768 1380 ntBASIC17.67■□□□□ 0.42
LRRC3Q9BY71 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 AC005237.2-201ENST00000434368 219 ntBASIC17.67■□□□□ 0.42
LRRC3Q9BY71 SPCS2P4-201ENST00000436160 681 ntBASIC17.67■□□□□ 0.42
LRRC3Q9BY71 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 LINC00896-202ENST00000609602 2128 ntBASIC17.67■□□□□ 0.42
LRRC3Q9BY71 AL161645.1-201ENST00000622716 1255 ntBASIC17.67■□□□□ 0.42
LRRC3Q9BY71 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms