Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AL035456.1-201ENST00000456064 1369 ntBASIC18.03■□□□□ 0.48
RAD9AQ99638 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAD9AQ99638 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAD9AQ99638 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAD9AQ99638 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.03■□□□□ 0.48
RAD9AQ99638 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RAD9AQ99638 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.02■□□□□ 0.48
RAD9AQ99638 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 BCL2-203ENST00000589955 5011 ntBASIC18.02■□□□□ 0.48
RAD9AQ99638 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RAD9AQ99638 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAD9AQ99638 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RAD9AQ99638 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAD9AQ99638 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.02■□□□□ 0.48
RAD9AQ99638 AL353779.1-201ENST00000434793 351 ntBASIC18.02■□□□□ 0.48
RAD9AQ99638 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.02■□□□□ 0.48
RAD9AQ99638 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.02■□□□□ 0.48
RAD9AQ99638 MPDU1-223ENST00000582151 728 ntBASIC18.02■□□□□ 0.48
RAD9AQ99638 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.02■□□□□ 0.48
RAD9AQ99638 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.02■□□□□ 0.48
RAD9AQ99638 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAD9AQ99638 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAD9AQ99638 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RAD9AQ99638 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 AC007541.1-201ENST00000570282 1469 ntBASIC18.01■□□□□ 0.47
RAD9AQ99638 AC087499.5-201ENST00000452760 1342 ntBASIC18.01■□□□□ 0.47
RAD9AQ99638 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAD9AQ99638 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.01■□□□□ 0.47
RAD9AQ99638 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 AC090164.3-201ENST00000610780 2143 ntBASIC18.01■□□□□ 0.47
RAD9AQ99638 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.01■□□□□ 0.47
RAD9AQ99638 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 KRT18P34-201ENST00000488218 1270 ntBASIC18.01■□□□□ 0.47
RAD9AQ99638 AC009407.1-201ENST00000568958 598 ntBASIC18.01■□□□□ 0.47
RAD9AQ99638 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.01■□□□□ 0.47
RAD9AQ99638 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.01■□□□□ 0.47
RAD9AQ99638 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RAD9AQ99638 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.01■□□□□ 0.47
RAD9AQ99638 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.01■□□□□ 0.47
RAD9AQ99638 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RAD9AQ99638 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RAD9AQ99638 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAD9AQ99638 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
RAD9AQ99638 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.01■□□□□ 0.47
RAD9AQ99638 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18■□□□□ 0.47
RAD9AQ99638 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RAD9AQ99638 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RAD9AQ99638 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18■□□□□ 0.47
RAD9AQ99638 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18■□□□□ 0.47
RAD9AQ99638 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RAD9AQ99638 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RAD9AQ99638 AC098614.1-201ENST00000368528 745 ntBASIC18■□□□□ 0.47
RAD9AQ99638 IGHV3-71-201ENST00000523324 359 ntBASIC18■□□□□ 0.47
RAD9AQ99638 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18■□□□□ 0.47
RAD9AQ99638 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18■□□□□ 0.47
RAD9AQ99638 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18■□□□□ 0.47
RAD9AQ99638 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18■□□□□ 0.47
RAD9AQ99638 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18■□□□□ 0.47
RAD9AQ99638 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18■□□□□ 0.47
RAD9AQ99638 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18■□□□□ 0.47
RAD9AQ99638 AC138969.3-201ENST00000546612 1459 ntBASIC18■□□□□ 0.47
RAD9AQ99638 AC138932.2-201ENST00000548268 1459 ntBASIC18■□□□□ 0.47
RAD9AQ99638 AC126755.4-201ENST00000549796 1459 ntBASIC18■□□□□ 0.47
RAD9AQ99638 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms