Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA3Q99618 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA3Q99618 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA3Q99618 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDCA3Q99618 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA3Q99618 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDCA3Q99618 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.53■□□□□ 0.4
CDCA3Q99618 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
CDCA3Q99618 DFFBP1-201ENST00000433250 979 ntBASIC17.53■□□□□ 0.4
CDCA3Q99618 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CDCA3Q99618 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.53■□□□□ 0.4
CDCA3Q99618 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.53■□□□□ 0.4
CDCA3Q99618 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.53■□□□□ 0.4
CDCA3Q99618 SPTSSB-204ENST00000617024 1292 ntBASIC17.53■□□□□ 0.4
CDCA3Q99618 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA3Q99618 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA3Q99618 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA3Q99618 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 FOXO1B-201ENST00000504678 1527 ntBASIC17.52■□□□□ 0.4
CDCA3Q99618 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CDCA3Q99618 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA3Q99618 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CDCA3Q99618 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 RPL37AP1-201ENST00000412502 279 ntBASIC17.52■□□□□ 0.4
CDCA3Q99618 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA3Q99618 MTND6P24-201ENST00000440466 518 ntBASIC17.52■□□□□ 0.4
CDCA3Q99618 GIMAP3P-201ENST00000495150 836 ntBASIC17.52■□□□□ 0.4
CDCA3Q99618 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CDCA3Q99618 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA3Q99618 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA3Q99618 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.52■□□□□ 0.4
CDCA3Q99618 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.52■□□□□ 0.4
CDCA3Q99618 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.52■□□□□ 0.4
CDCA3Q99618 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.52■□□□□ 0.4
CDCA3Q99618 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.52■□□□□ 0.4
CDCA3Q99618 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.52■□□□□ 0.4
CDCA3Q99618 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.52■□□□□ 0.4
CDCA3Q99618 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA3Q99618 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA3Q99618 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA3Q99618 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.52■□□□□ 0.39
CDCA3Q99618 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA3Q99618 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.52■□□□□ 0.39
CDCA3Q99618 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA3Q99618 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.52■□□□□ 0.39
CDCA3Q99618 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.52■□□□□ 0.39
CDCA3Q99618 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDCA3Q99618 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA3Q99618 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA3Q99618 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.51■□□□□ 0.39
CDCA3Q99618 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA3Q99618 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
CDCA3Q99618 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.51■□□□□ 0.39
CDCA3Q99618 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDCA3Q99618 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.51■□□□□ 0.39
CDCA3Q99618 AC098859.1-201ENST00000502915 1238 ntBASIC17.51■□□□□ 0.39
CDCA3Q99618 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA3Q99618 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA3Q99618 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
CDCA3Q99618 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CDCA3Q99618 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDCA3Q99618 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA3Q99618 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDCA3Q99618 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA3Q99618 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA3Q99618 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA3Q99618 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA3Q99618 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA3Q99618 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDCA3Q99618 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms