Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.43□□□□□ -0.1
CLCC1Q96S66 ZNF444P1-201ENST00000559497 298 ntBASIC14.43□□□□□ -0.1
CLCC1Q96S66 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.43□□□□□ -0.1
CLCC1Q96S66 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.43□□□□□ -0.1
CLCC1Q96S66 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.43□□□□□ -0.1
CLCC1Q96S66 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLCC1Q96S66 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLCC1Q96S66 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLCC1Q96S66 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CLCC1Q96S66 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.43□□□□□ -0.1
CLCC1Q96S66 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.43□□□□□ -0.1
CLCC1Q96S66 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
CLCC1Q96S66 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLCC1Q96S66 AC132938.6-201ENST00000623828 1655 ntBASIC14.42□□□□□ -0.1
CLCC1Q96S66 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.42□□□□□ -0.1
CLCC1Q96S66 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
CLCC1Q96S66 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLCC1Q96S66 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 LINC01311-201ENST00000565162 1445 ntBASIC14.41□□□□□ -0.1
CLCC1Q96S66 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 DUX4L26-201ENST00000489078 1255 ntBASIC14.41□□□□□ -0.1
CLCC1Q96S66 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 SBF1P1-201ENST00000444527 5631 ntBASIC14.41□□□□□ -0.1
CLCC1Q96S66 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLCC1Q96S66 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.41□□□□□ -0.1
CLCC1Q96S66 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLCC1Q96S66 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLCC1Q96S66 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLCC1Q96S66 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLCC1Q96S66 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.4□□□□□ -0.1
CLCC1Q96S66 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLCC1Q96S66 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLCC1Q96S66 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.4□□□□□ -0.1
CLCC1Q96S66 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLCC1Q96S66 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
CLCC1Q96S66 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLCC1Q96S66 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms