Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 AC105020.1-201ENST00000435356 2205 ntBASIC16.17■□□□□ 0.18
BBS4Q96RK4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 AC008608.2-201ENST00000606089 416 ntBASIC16.17■□□□□ 0.18
BBS4Q96RK4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 AL355877.3-201ENST00000622820 899 ntBASIC16.17■□□□□ 0.18
BBS4Q96RK4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 FRMD8P1-201ENST00000440433 1524 ntBASIC16.17■□□□□ 0.18
BBS4Q96RK4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 NCF1C-201ENST00000438382 1427 ntBASIC16.17■□□□□ 0.18
BBS4Q96RK4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.17■□□□□ 0.18
BBS4Q96RK4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BBS4Q96RK4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.16■□□□□ 0.18
BBS4Q96RK4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 KRT18P56-201ENST00000507275 550 ntBASIC16.16■□□□□ 0.18
BBS4Q96RK4 CLEC4GP1-201ENST00000596555 870 ntBASIC16.16■□□□□ 0.18
BBS4Q96RK4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
BBS4Q96RK4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BBS4Q96RK4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 SCARNA2-201ENST00000458748 420 ntBASIC16.15■□□□□ 0.18
BBS4Q96RK4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 AC012313.10-201ENST00000623509 926 ntBASIC16.15■□□□□ 0.18
BBS4Q96RK4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BBS4Q96RK4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
BBS4Q96RK4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms