Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 TFAMP1-201ENST00000412727 736 ntBASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 AC015922.1-201ENST00000421102 1152 ntBASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 AC079140.1-201ENST00000508039 487 ntBASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 AC063926.2-201ENST00000623766 1308 ntBASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 LYSMD4-203ENST00000378904 2122 ntBASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 AC243562.1-201ENST00000560672 389 ntBASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 AP001059.3-201ENST00000619053 235 ntBASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 AC046185.3-201ENST00000623228 1824 ntBASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A1Q96NT5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 TUBB3P1-201ENST00000405796 1332 ntBASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 KRT18P32-201ENST00000424695 1287 ntBASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms