Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PCDHA1-201ENST00000378133 2726 ntBASIC14.87□□□□□ -0.03
CPNE2Q96FN4 LINC02199-201ENST00000506655 2702 ntBASIC14.87□□□□□ -0.03
CPNE2Q96FN4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 FLJ38576-201ENST00000623820 2459 ntBASIC14.87□□□□□ -0.03
CPNE2Q96FN4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 AC103702.1-201ENST00000548801 2630 ntBASIC14.86□□□□□ -0.03
CPNE2Q96FN4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 RN7SL606P-201ENST00000472779 293 ntBASIC14.86□□□□□ -0.03
CPNE2Q96FN4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 STK19B-204ENST00000512515 211 ntBASIC14.86□□□□□ -0.03
CPNE2Q96FN4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE2Q96FN4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 DOC2GP-204ENST00000639052 2548 ntBASIC14.85□□□□□ -0.03
CPNE2Q96FN4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 KRT8P26-201ENST00000534154 1276 ntBASIC14.85□□□□□ -0.03
CPNE2Q96FN4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 AC011498.5-201ENST00000592027 486 ntBASIC14.85□□□□□ -0.03
CPNE2Q96FN4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.85□□□□□ -0.03
CPNE2Q96FN4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 AC105020.1-201ENST00000435356 2205 ntBASIC14.85□□□□□ -0.03
CPNE2Q96FN4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms